Lecture Notes

Jie Liang; Dept of Bioengeinggering;
University of Illinois at Chicago;

2009 DragonStar Lecture Series.

Computational Methods for Structural Bioinformatics and Computational Biology

Chinese National Science Foundation; Institute of Computing Technology, Chinese Academy of Sciences; and Suzhou University.

Lecture 1 - Sequence Comparison
Lecture 2 - Protein Structure: Alignment and Predictions
Lecture 3 - Protein Geometry and Topology: Volume and Surface
Lecture 4 - Simplified Protein Structure Model, Markov Chain Monte Carlo, and Sequential Monte Carlo Sampling
Lecture 5 - Empirical Potential Function for Structure Prediction and Design

Thanks to Prof. Dong Xu at U of Missouri at Columbia for allowing me to use some of his lecture notes, to Joe Dundas for several slides.

2009 8-th International Summer School on Biocomplexity from Gene to System.

July 1 - 7, 2009 Bogazici University, Istanbul, Turkey. NSF, IEEE-EMB

Lecture 1 - Geometry of Proteins
Lecture 2 - Protein Surfaces and Functions